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pU6-DNMT1-PegRNA-H1-Nicking sgRNA载体质粒基本信息

质粒名称: pU6-DNMT1-PegRNA-H1-Nicking sgRNA
出品公司: Wekwikgene
目录编号: 0002210
产品用途: Simultaneously express pegRNA and nicking sgRNA targeting the DNMT1 gene
存储实验室: Zhuobin Liang Lab 梁卓斌课题组

载体骨架基本信息
载体名称:
pU6
表达系统: 哺乳动物表达
启动子: U6, H1
拷贝数: 高拷贝
载体抗性: 氨苄霉素
生长温度: 37 ℃
宿主菌: DH5alpha

插入基因信息
插入基因名称: DNMT1-pegRNA-nicking-sgRNA
物种来源: H.sapiens
密码子优化: 未优化

文献引用方法
参考文献部分:
TRU-PE: A Universal, Trackable Prime Editor Toolkit for Robust Single-and Multi-Locus Genome Engineering
Zhichao Qiu, Keke Sun, Qingwei Zeng, Ziwei Luo, Xinran Liu, Yaping Li, Xiang Lei, Ruilin Zhao, Zhen Zhang, Damia Romero-Moya, Yuan Yang, Xuan Wang, Ehsan Hashemi, Joe Z. Zhang, Xiaolong Wang, Alessandra Giorgetti, Zhuobin Liang
bioRxiv 2026.02.20.706938

pU6-DNMT1-PegRNA-H1-Nicking sgRNA质粒图谱载体图谱和pU6-DNMT1-PegRNA-H1-Nicking sgRNA载体序列质粒序列多克隆位点信息

pU6-DNMT1-PegRNA-H1-Nicking sgRNA载体图谱.png

pU6-DNMT1-PegRNA-H1-Nicking sgRNA质粒载体简介

pU6-DNMT1-PegRNA-H1-Nicking sgRNA质粒序列载体序列

LOCUS      pU6-DNMT1-PegRNA-H1-Nicking sgRNA              5302 bp DNA     circular SYN 07-NOV-2025
DEFINITION  synthetic circular DNA
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 5302)
  AUTHORS   .
  TITLE     Direct Submission
  JOURNAL   Exported Aug 21, 2026 from SnapGene 6.0.2
            https://www.biofeng.com
FEATURES             Location/Qualifiers
     source          1..5302
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     promoter        72..320
                     /label=U6 promoter
                     /note="RNA polymerase III promoter for human U6 snRNA"
     primer_bind     72..92
                     /label=hU6-F
                     /note="Human U6 promoter, forward primer"
     primer_bind     243..262
                     /label=LKO.1 5'
                     /note="Human U6 promoter, forward primer"
     primer_bind     318..343
                     /label=OL2770
     misc_feature    321..340
                     /label=DNMT1 spacer
     misc_RNA        341..416
                     /label=gRNA scaffold
                     /note="guide RNA scaffold for the Streptococcus pyogenes 
                     CRISPR/Cas9 system"
     misc_feature    417..427
                     /label=RT template
     primer_bind     complement(421..458)
                     /label=OL2771
     misc_feature    423
                     /label=C352A
     misc_feature    428..440
                     /label=PBS
     misc_feature    448..663
                     /label=H1 promoter
     primer_bind     451..467
                     /label=OL2772
     primer_bind     583..602
                     /label=H1
                     /note="Human H1 promoter, forward primer"
     primer_bind     complement(655..697)
                     /label=OL2773
     misc_feature    673..693
                     /label=DNMT1 nickingRNA
     misc_RNA        694..769
                     /label=gRNA scaffold
                     /note="guide RNA scaffold for the Streptococcus pyogenes 
                     CRISPR/Cas9 system"
     misc_feature    821..938
                     /label=cPPT/CTS
                     /note="central polypurine tract and central termination 
                     sequence of HIV-1"
     promoter        987..1497
                     /label=hPGK promoter
                     /note="human phosphoglycerate kinase 1 promoter"
     primer_bind     1416..1434
                     /label=hPGK-F
                     /note="Human PGK promoter, forward primer"
     CDS             1519..2118
                     /codon_start=1
                     /gene="pac from Streptomyces alboniger"
                     /product="puromycin N-acetyltransferase"
                     /label=PuroR
                     /note="confers resistance to puromycin"
                     /translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER
                     VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA
                     AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS
                     APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA"
     primer_bind     complement(1519..1538)
                     /label=Puro-R
                     /note="Puromycin resistance gene, reverse primer. Also 
                     called puro-variant-R"
     primer_bind     2015..2035
                     /label=Puro-F
                     /note="Puromycin resistance gene, forward primer"
     polyA_signal    2265..2386
                     /label=SV40 poly(A) signal
                     /note="SV40 polyadenylation signal"
     primer_bind     complement(2276..2295)
                     /label=EBV-rev
                     /note="SV40 polyA terminator, reverse primer"
     primer_bind     2330..2349
                     /label=SV40pA-R
                     /note="SV40 polyA, reverse primer"
     primer_bind     complement(2634..2651)
                     /label=L4440
                     /note="L4440 vector, forward primer"
     rep_origin      complement(2805..3393)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     primer_bind     complement(2885..2904)
                     /label=pBR322ori-F
                     /note="pBR322 origin, forward primer"
     CDS             complement(3564..4424)
                     /codon_start=1
                     /gene="bla"
                     /product="beta-lactamase"
                     /label=AmpR
                     /note="confers resistance to ampicillin, carbenicillin, and
                     related antibiotics"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     primer_bind     4187..4206
                     /label=Amp-R
                     /note="Ampicillin resistance gene, reverse primer"
     promoter        complement(4425..4529)
                     /gene="bla"
                     /label=AmpR promoter
     rep_origin      4556..5011
                     /direction=RIGHT
                     /label=f1 ori
                     /note="f1 bacteriophage origin of replication; arrow 
                     indicates direction of (+) strand synthesis"
     primer_bind     complement(4643..4662)
                     /label=F1ori-R
                     /note="F1 origin, reverse primer"
     primer_bind     4853..4874
                     /label=F1ori-F
                     /note="F1 origin, forward primer"
     polyA_signal    5142..5190
                     /note="synthetic polyadenylation signal"
     misc_feature    5204..5295
                     /label=pause site
                     /note="RNA polymerase II transcriptional pause signal from 
                     the human alpha-2 globin gene"
     primer_bind     5244..5263
                     /label=RVprimer3
                     /note="pGL3 vector, forward primer"
ORIGIN
        1 ggtaccgatt agtgaacgga tctcgacggt atcgatcacg agactagcct cgagcggccg
       61 cccccttcac cgagggccta tttcccatga ttccttcata tttgcatata cgatacaagg
      121 ctgttagaga gataattgga attaatttga ctgtaaacac aaagatatta gtacaaaata
      181 cgtgacgtag aaagtaataa tttcttgggt agtttgcagt tttaaaatta tgttttaaaa
      241 tggactatca tatgcttacc gtaacttgaa agtatttcga tttcttggct ttatatatct
      301 tgtggaaagg acgaaacacc gattcctggt gccagaaaca gttttagagc tagaaatagc
      361 aagttaaaat aaggctagtc cgttatcaac ttgaaaaagt ggcaccgagt cggtgcgtca
      421 ccactgtttc tggcaccagg tttttttgaa cgctgacgtc atcaacccgc tccaaggaat
      481 cgcgggccca gtgtcactag gcgggaacac ccagcgcgcg tgcgccctgg caggaagatg
      541 gctgtgaggg acaggggagt ggcgccctgc aatatttgca tgtcgctatg tgttctggga
      601 aatcaccata aacgtgaaat gtctttggat ttgggaatct tataagttct gtatgaggac
      661 cacgaaacac cggcccttca gctaaaataa agggttttag agctagaaat agcaagttaa
      721 aataaggcta gtccgttatc aacttgaaaa agtggcaccg agtcggtgct ttttttaaag
      781 aattctcgac ctcgagacaa atggcagtat tcatccacaa ttttaaaaga aaagggggga
      841 ttggggggta cagtgcaggg gaaagaatag tagacataat agcaacagac atacaaacta
      901 aagaattaca aaaacaaatt acaaaaattc aaaattttcg ggtttattac agggacagca
      961 gagatccact ttggccgcgg ctcgaggggg ttggggttgc gccttttcca aggcagccct
     1021 gggtttgcgc agggacgcgg ctgctctggg cgtggttccg ggaaacgcag cggcgccgac
     1081 cctgggactc gcacattctt cacgtccgtt cgcagcgtca cccggatctt cgccgctacc
     1141 cttgtgggcc ccccggcgac gcttcctgct ccgcccctaa gtcgggaagg ttccttgcgg
     1201 ttcgcggcgt gccggacgtg acaaacggaa gccgcacgtc tcactagtac cctcgcagac
     1261 ggacagcgcc agggagcaat ggcagcgcgc cgaccgcgat gggctgtggc caatagcggc
     1321 tgctcagcag ggcgcgccga gagcagcggc cgggaagggg cggtgcggga ggcggggtgt
     1381 ggggcggtag tgtgggccct gttcctgccc gcgcggtgtt ccgcattctg caagcctccg
     1441 gagcgcacgt cggcagtcgg ctccctcgtt gaccgaatca ccgacctctc tccccagggg
     1501 gatccaccgg agcttaccat gaccgagtac aagcccacgg tgcgcctcgc cacccgcgac
     1561 gacgtcccca gggccgtacg caccctcgcc gccgcgttcg ccgactaccc cgccacgcgc
     1621 cacaccgtcg atccggaccg ccacatcgag cgggtcaccg agctgcaaga actcttcctc
     1681 acgcgcgtcg ggctcgacat cggcaaggtg tgggtcgcgg acgacggcgc cgcggtggcg
     1741 gtctggacca cgccggagag cgtcgaagcg ggggcggtgt tcgccgagat cggcccgcgc
     1801 atggccgagt tgagcggttc ccggctggcc gcgcagcaac agatggaagg cctcctggcg
     1861 ccgcaccggc ccaaggagcc cgcgtggttc ctggccaccg tcggcgtctc gcccgaccac
     1921 cagggcaagg gtctgggcag cgccgtcgtg ctccccggag tggaggcggc cgagcgcgcc
     1981 ggggtgcccg ccttcctgga aacctccgcg ccccgcaacc tccccttcta cgagcggctc
     2041 ggcttcaccg tcaccgccga cgtcgaggtg cccgaaggac cgcgcacctg gtgcatgacc
     2101 cgcaagcccg gtgcctgacg cccgccccac gacccgcagc gcccgaccga aaggagcgca
     2161 cgaccccatg catcggtacc tttaagacca atgacttaca aggcagctgt agatcttagc
     2221 cactttctag agtcggggcg gccggccgct tcgagcagac atgataagat acattgatga
     2281 gtttggacaa accacaacta gaatgcagtg aaaaaaatgc tttatttgtg aaatttgtga
     2341 tgctattgct ttatttgtaa ccattataag ctgcaataaa caagttaaca acaacaattg
     2401 cattcatttt atgtttcagg ttcaggggga ggtgtgggag gttttttaaa gcaagtaaaa
     2461 cctctacaaa tgtggtaaaa tcgataagga tccgtcgacc gatgcccttg agagccttca
     2521 acccagtcag ctccttccgg tgggcgcggg gcatgactat cgtcgccgca cttatgactg
     2581 tcttctttat catgcaactc gtaggacagg tgccggcagc gctcttccgc ttcctcgctc
     2641 actgactcgc tgcgctcggt cgttcggctg cggcgagcgg tatcagctca ctcaaaggcg
     2701 gtaatacggt tatccacaga atcaggggat aacgcaggaa agaacatgtg agcaaaaggc
     2761 cagcaaaagg ccaggaaccg taaaaaggcc gcgttgctgg cgtttttcca taggctccgc
     2821 ccccctgacg agcatcacaa aaatcgacgc tcaagtcaga ggtggcgaaa cccgacagga
     2881 ctataaagat accaggcgtt tccccctgga agctccctcg tgcgctctcc tgttccgacc
     2941 ctgccgctta ccggatacct gtccgccttt ctcccttcgg gaagcgtggc gctttctcat
     3001 agctcacgct gtaggtatct cagttcggtg taggtcgttc gctccaagct gggctgtgtg
     3061 cacgaacccc ccgttcagcc cgaccgctgc gccttatccg gtaactatcg tcttgagtcc
     3121 aacccggtaa gacacgactt atcgccactg gcagcagcca ctggtaacag gattagcaga
     3181 gcgaggtatg taggcggtgc tacagagttc ttgaagtggt ggcctaacta cggctacact
     3241 agaagaacag tatttggtat ctgcgctctg ctgaagccag ttaccttcgg aaaaagagtt
     3301 ggtagctctt gatccggcaa acaaaccacc gctggtagcg gtggtttttt tgtttgcaag
     3361 cagcagatta cgcgcagaaa aaaaggatct caagaagatc ctttgatctt ttctacgggg
     3421 tctgacgctc agtggaacga aaactcacgt taagggattt tggtcatgag attatcaaaa
     3481 aggatcttca cctagatcct tttaaattaa aaatgaagtt ttaaatcaat ctaaagtata
     3541 tatgagtaaa cttggtctga cagttaccaa tgcttaatca gtgaggcacc tatctcagcg
     3601 atctgtctat ttcgttcatc catagttgcc tgactccccg tcgtgtagat aactacgata
     3661 cgggagggct taccatctgg ccccagtgct gcaatgatac cgcgggaccc acgctcaccg
     3721 gctccagatt tatcagcaat aaaccagcca gccggaaggg ccgagcgcag aagtggtcct
     3781 gcaactttat ccgcctccat ccagtctatt aattgttgcc gggaagctag agtaagtagt
     3841 tcgccagtta atagtttgcg caacgttgtt gccattgcta caggcatcgt ggtgtcacgc
     3901 tcgtcgtttg gtatggcttc attcagctcc ggttcccaac gatcaaggcg agttacatga
     3961 tcccccatgt tgtgcaaaaa agcggttagc tccttcggtc ctccgatcgt tgtcagaagt
     4021 aagttggccg cagtgttatc actcatggtt atggcagcac tgcataattc tcttactgtc
     4081 atgccatccg taagatgctt ttctgtgact ggtgagtact caaccaagtc attctgagaa
     4141 tagtgtatgc ggcgaccgag ttgctcttgc ccggcgtcaa tacgggataa taccgcgcca
     4201 catagcagaa ctttaaaagt gctcatcatt ggaaaacgtt cttcggggcg aaaactctca
     4261 aggatcttac cgctgttgag atccagttcg atgtaaccca ctcgtgcacc caactgatct
     4321 tcagcatctt ttactttcac cagcgtttct gggtgagcaa aaacaggaag gcaaaatgcc
     4381 gcaaaaaagg gaataagggc gacacggaaa tgttgaatac tcatactctt cctttttcaa
     4441 tattattgaa gcatttatca gggttattgt ctcatgagcg gatacatatt tgaatgtatt
     4501 tagaaaaata aacaaatagg ggttccgcgc acatttcccc gaaaagtgcc acctgacgcg
     4561 ccctgtagcg gcgcattaag cgcggcgggt gtggtggtta cgcgcagcgt gaccgctaca
     4621 cttgccagcg ccctagcgcc cgctcctttc gctttcttcc cttcctttct cgccacgttc
     4681 gccggctttc cccgtcaagc tctaaatcgg gggctccctt tagggttccg atttagtgct
     4741 ttacggcacc tcgaccccaa aaaacttgat tagggtgatg gttcacgtag tgggccatcg
     4801 ccctgataga cggtttttcg ccctttgacg ttggagtcca cgttctttaa tagtggactc
     4861 ttgttccaaa ctggaacaac actcaaccct atctcggtct attcttttga tttataaggg
     4921 attttgccga tttcggccta ttggttaaaa aatgagctga tttaacaaaa atttaacgcg
     4981 aattttaaca aaatattaac gcttacaatt tgccattcgc cattcaggct gcgcaactgt
     5041 tgggaagggc gatcggtgcg ggcctcttcg ctattacgcc agcccaagct accatgataa
     5101 gtaagtaata ttaaggtacg ggaggtactt ggagcggccg caataaaata tctttatttt
     5161 cattacatct gtgtgttggt tttttgtgtg aatcgatagt actaacatac gctctccatc
     5221 aaaacaaaac gaaacaaaac aaactagcaa aataggctgt ccccagtgca agtgcaggtg
     5281 ccagaacatt tctctatcga ta
//

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